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Can Genetically Engineered Microbes (GEMs) be used safely in open-release?

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  • Overview
Genetic engineering and synthetic biology have enabled the development of microbes with new capabilities that can improve our lives and our relationship with the planet. In the lab, these genetically engineered microbes (GEMs) can produce commodity chemicals and pharmaceuticals in a “green” way, fix nitrogen instead of chemical fertilizers, degrade pollutants, and more. However, the lack of environmental risk assessment data has prevented the commercialization of many GEMs. While some GEMs can be grown within a contained system, many applications require open-release of the GEMs into the environment, such as bioremediation and biofertilizers. In these open-release applications, there are unknown risks to the native microbiome at the application site, in addition to the known risk of the GEM proliferating outside the application site. My project focuses on identifying the risks of GEMs intended for open-release application by tracking the persistence of a GEM and any changes to the bacterial community where it is introduced. Starting with a GEM I designed to degrade PET, we will additionally test GEMs developed by our collaborators, both with and without biocontainment strategies. By the end of this project, we aim to assess the environmental risks of GEMs in open-release and recommend biocontainment strategies to decrease that risk. This will provide the knowledge needed for researchers and regulators to make safe decisions regarding the use of GEMs in open-release applications.

Impact/Purpose

This presentation will be made at the 2024 ORISE Ignite Off! competition, and it covers ground-breaking research at ORD/CPHEA/PESD within Product CSS.403.2.1 - Data to support risk assessments of novel engineered microbes. The presentation will give an overview of the research plan for environmental risk assessment of GEMs, including bioengineering a model organism to be used in those experiments. The research addresses the Agency needs for updated detection and tracking methods for genetically engineered microorganisms (GEMs) being tested under containment for their persistence, performance, and efficacy. The presentation is to a public and non-technical audience to bring increased visibility to Agency research, and will also provide context for why this research is important (possible risks to the native microbiome at the application site, possible solutions through biocontainment).

Citation

Svoboda, Jessee. Can Genetically Engineered Microbes (GEMs) be used safely in open-release? 2024 ORISE Ignite-Off! Competition, Corvallis, OR, July 31 - August 01, 2024.
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Last updated on September 13, 2024
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